This section lists preprints and published work describing EnzymeML and core EnzymeML-supporting software tools.
Original Peer Review Papers
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Malzacher S, Range J, Halupczok C, Pleiss J, Rother D (2020). BioCatHub, a graphical user interface for standardized data acquisition in biocatalysis. Chemie Ingenieur Technik 92, 1251-1251. doi: 10.1002/cite.202055297
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Pleiss, J. Standardized data, Scalable Documentation, sustainable storage – Enzymeml as a basis for fair data management in biocatalysis. ChemCatChem 13, 3909–3913 (2021). doi: 10.1002/cctc.202100822
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Range, J., Halupczok, C., Lohmann, J., Swainston, N., Kettner, C., Bergmann, F.T., Weidemann, A., Wittig, U., Schnell, S. and Pleiss, J. (2022), EnzymeML—a data exchange format for biocatalysis and enzymology. FEBS J, 289: 5864-5874. doi: 10.1111/febs.16318
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Lauterbach S, Dienhart H, Range J, Malzacher S, Spöring JD, Rother D, Pinto MF, Martins P, Lagerman CE, Bommarius AS, Vang Høst A, Woodley JM, Ngubane S, Kudanga T, Bergmann FT, Rohwer JM, Iglezakis D, Weidemann A, Wittig U, Kettner C, Swainston N, Schnell S, Pleiss J. EnzymeML: seamless data flow and modeling of enzymatic data. Nat Methods (in press), doi: 10.1038/s41592-022-01763-1
